JournalTOCs

Environmental DNA
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This is an Open Access Journal

Open Access journal
ISSN (Online) 2637-4943
Published by John Wiley and Sons

[1763 journals]

Issue Information
- Abstract: Environmental DNA, Volume 4, Issue 2, Page 269-270, March 2022.
  PubDate: 2022-03-31T02:36:08-07:00
  DOI: 10.1002/edn3.210
  Issue No: Vol. 4, No. 2 (2022)
Cover Image
- Abstract: Environmental DNA, Volume 4, Issue 2, Page i-i, March 2022.
  PubDate: 2022-03-31T02:36:08-07:00
  DOI: 10.1002/edn3.211
  Issue No: Vol. 4, No. 2 (2022)
Development of a triplex droplet digital polymerase chain reaction assay
for the detection of three New Zealand native freshwater mussels
(Echyridella) in environmental samples
- Authors: Konstanze Steiner; Niamh Dyer, Charles K. Lee, Marcus J. Vandergoes, Susanna A. Wood
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-05-06T02:44:20-07:00
  DOI: 10.1002/edn3.302
Using quantitative eDNA analyses to accurately estimate American bullfrog
abundance and to evaluate management efficacy
- Authors: Teun Everts; Charlotte Van Driessche, Sabrina Neyrinck, Nico De Regge, Sarah Descamps, Alain De Vocht, Hans Jacquemyn, Rein Brys
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-05-05T01:46:04-07:00
  DOI: 10.1002/edn3.301
Application of eDNA for monitoring freshwater bivalve Nodularia
nipponensis and its glochidium larvae
- Authors: Kotaro Sugawara; Yudai Sasaki, Kunihiro Okano, Miho Watanabe, Naoyuki Miyata
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-05-03T05:14:21-07:00
  DOI: 10.1002/edn3.304
Disentangling the components of coastal fish biodiversity in southern
Brittany by applying an environmental DNA approach
- Authors: Romane Rozanski; Verena M. Trenkel, Pascal Lorance, Alice Valentini, Tony Dejean, Loïc Pellissier, David Eme, Camille Albouy
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-05-03T04:41:54-07:00
  DOI: 10.1002/edn3.305
Urban environments harbor greater oomycete and Phytophthora diversity,
creating a bridgehead for potential new pathogens to natural ecosystems
- Authors: Angela L. Dale; Nicolas Feau, Jean A. Berube, Julien Ponchart, Guillaume J. Bilodeau, Richard C. Hamelin
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-04-22T01:42:04-07:00
  DOI: 10.1002/edn3.300
MIDORI2: A collection of quality controlled, preformatted, and regularly
updated reference databases for taxonomic assignment of eukaryotic
mitochondrial sequences
- Authors: Matthieu Leray; Nancy Knowlton, Ryuji J. Machida
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-04-11T02:40:41-07:00
  DOI: 10.1002/edn3.303
Strong positive relationships between eDNA concentrations and biomass in
juvenile and adult pike (Esox lucius) under controlled conditions:
Implications for monitoring
- Authors: Erik Karlsson; Martin Ogonowski, Göran Sundblad, Josefin Sundin, Ofir Svensson, Ilkka Nousiainen, Anti Vasemägi
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-03-29T06:41:53-07:00
  DOI: 10.1002/edn3.298
Leveraging eDNA metabarcoding to characterize nearshore fish communities
in Southeast Alaska: Do habitat and tide matter'
- Authors: Wesley A. Larson; Patrick Barry, Willie Dokai, Jacek Maselko, John Olson, Diana Baetscher
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-03-29T06:26:10-07:00
  DOI: 10.1002/edn3.297
Environmental DNA captures elasmobranch diversity in a temperate marine
ecosystem
- Authors: Zifang Liu; Rupert A. Collins, Charles Baillie, Sophie Rainbird, Rachel Brittain, Andrew M. Griffiths, David W. Sims, Stefano Mariani, Martin J. Genner
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-03-24T10:42:46-07:00
  DOI: 10.1002/edn3.294
Vegetation changes over the last centuries in the Lower Lake Constance
region reconstructed from sediment‐core environmental DNA
- Authors: Anan Ibrahim; Stefanie Höckendorff, David Schleheck, Laura Epp, Mark Kleunen, Axel Meyer
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-03-23T10:31:12-07:00
  DOI: 10.1002/edn3.292
Diet DNA reveals novel African Forest elephant ecology on the grasslands
of the Congo Basin
- Authors: Jordana M. Meyer; Naftali Honig, Elizabeth A. Hadly
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-03-23T09:59:30-07:00
  DOI: 10.1002/edn3.296
Detection of a cryptic terrestrial insect using novel eDNA collection
techniques
- Authors: Catriona D. Campbell; Dianne M. Gleeson, Elise M. Furlan, Kate A. Muirhead, Valerie Caron
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-03-17T09:09:17-07:00
  DOI: 10.1002/edn3.295
Developmental microbiome of the small carpenter bee, Ceratina calcarata
- Authors: Phuong N. Nguyen; Sandra M. Rehan
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-03-12T03:55:08-08:00
  DOI: 10.1002/edn3.291
Airborne environmental DNA metabarcoding for the monitoring of terrestrial
insects—A proof of concept from the field
- Authors: Fabian Roger; Hamid R. Ghanavi, Natalie Danielsson, Niklas Wahlberg, Jakob Löndahl, Lars B. Pettersson, Georg K. S. Andersson, Niklas Boke Olén, Yann Clough
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-03-11T09:39:32-08:00
  DOI: 10.1002/edn3.290
Practical eDNA sampling methods inferred from particle size distribution
and comparison of capture techniques for a Critically Endangered
elasmobranch
- Authors: Madalyn K. Cooper; Cecilia Villacorta‐Rath, Damien Burrows, Dean R. Jerry, Leah Carr, Adam Barnett, Charlie Huveneers, Colin A. Simpfendorfer
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-03-09T12:38:02-08:00
  DOI: 10.1002/edn3.279
High‐frequency and long‐term observations of eDNA from imperiled
salmonids in a coastal stream: Temporal dynamics, relationships with
environmental factors, and comparisons with conventional observations
- Authors: Ryan T. Searcy; Alexandria B. Boehm, Chloe Weinstock, Christina M. Preston, Scott Jensen, Brent Roman, James M. Birch, Christopher A. Scholin, Kyle S. Van Houtan, Joseph D. Kiernan, Kevan M. Yamahara
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-03-06T11:33:08-08:00
  DOI: 10.1002/edn3.293
Temporal changes of genetic structure and diversity in a marine diatom
genus discovered via metabarcoding
- Authors: Maria Valeria Ruggiero; Wiebe H.C.F. Kooistra, Roberta Piredda, Diana Sarno, Gianpaolo Zampicinini, Adriana Zingone, Marina Montresor
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-03-02T12:38:57-08:00
  DOI: 10.1002/edn3.288
Short‐term temporal variation of coastal marine eDNA
- Authors: Mads Reinholdt Jensen; Eva Egelyng Sigsgaard, Marcelo de Paula Ávila, Sune Agersnap, William Brenner‐Larsen, Mita Eva Sengupta, Yingchun Xing, Marcus Anders Krag, Steen Wilhelm Knudsen, Henrik Carl, Peter Rask Møller, Philip Francis Thomsen
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-02-23T07:29:40-08:00
  DOI: 10.1002/edn3.285
Metabarcoding of soil environmental DNA replicates plant community
variation but not specificity
- Authors: Christopher James Barnes; Ida Broman Nielsen, Anne Aagaard, Rasmus Ejrnæs, Anders Johannes Hansen, Tobias Guldberg Frøslev
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-02-22T03:10:11-08:00
  DOI: 10.1002/edn3.287
Effects of temperature and oxygen on cyanobacterial DNA preservation in
sediments: A comparison study of major taxa
- Authors: Hebah S. Mejbel; William Dodsworth, Frances R. Pick
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-02-19T01:43:13-08:00
  DOI: 10.1002/edn3.289
Environmental DNA detection and abundance estimates comparable to
conventional methods for three freshwater larval species at a power plant
discharge
- Authors: Douglas L. Bradley; Kevin C. Morey, Danielle A. Bourque, Brooks Fost, Tzitziki Loeza‐Quintana, Robert H. Hanner
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-02-16T03:03:43-08:00
  DOI: 10.1002/edn3.286
Tracking the prevalence of a fungal pathogen, Batrachochytrium
dendrobatidis (chytrid fungus), using environmental DNA
- Authors: Megan Congram; Sibelle Torres Vilaça, Chris C. Wilson, Chris J. Kyle, David Lesbarrères, Madison J. H. Wikston, Lynne Beaty, Dennis L. Murray
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-02-09T12:40:53-08:00
  DOI: 10.1002/edn3.283
Lost in dead wood' Environmental DNA sequencing from dead wood shows
little signs of saproxylic beetles
- Authors: Nathalie Winiger; Sebastian Seibold, Kay Lucek, Jörg Müller, Gernot Segelbacher
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-02-08T10:03:16-08:00
  DOI: 10.1002/edn3.284
Evaluating bioinformatics pipelines for population‐level inference
using environmental DNA
- Authors: Bastien Macé; Régis Hocdé, Virginie Marques, Pierre‐Edouard Guerin, Alice Valentini, Véronique Arnal, Loïc Pellissier, Stéphanie Manel
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-02-08T01:44:55-08:00
  DOI: 10.1002/edn3.269
Positive effect of filtration additives for increasing environmental DNA
detections in summer and winter oceanic waters
- Authors: Hyojin Ahn; Yusuke Asano, Shota Suzuki, Atsushi Ooki
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-02-08T01:39:24-08:00
  DOI: 10.1002/edn3.282
The artemis package for environmental DNA analysis in R
- Authors: Matthew B. Espe; Myfanwy Johnston, Scott M. Blankenship, Cheryl A. Dean, Mark D. Bowen, Andrew Schultz, Gregg Schumer
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-02-01T11:07:54-08:00
  DOI: 10.1002/edn3.277
Using eDNA presence/non‐detection data to characterize the abiotic and
biotic habitat requirements of a rare, elusive amphibian
- Authors: Ronith Gila Perl; Ella Avidor, Uri Roll, Yoram Malka, Eli Geffen, Sarig Gafny
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-01-28T11:46:43-08:00
  DOI: 10.1002/edn3.276
Make visible the invisible: Optimized development of an environmental DNA
metabarcoding tool for the characterization of trematode parasitic
communities
- Authors: Philippe Douchet; Jérôme Boissier, Stephen Mulero, Hubert Ferté, Margot Doberva, Jean‐François Allienne, Eve Toulza, Kévin Bethune, Olivier Rey
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-01-26T12:38:34-08:00
  DOI: 10.1002/edn3.273
Development of species‐specific multiplex real‐time PCR assays for
tracing the small pelagic fishes of North Pacific with environmental DNA
- Authors: Marty Kwok‐Shing Wong; Shigenori Nobata, Shin‐ichi Ito, Susumu Hyodo
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-01-14T11:40:24-08:00
  DOI: 10.1002/edn3.275
On the origin of feces: Fungal diversity, distribution, and conservation
implications from feces of small mammals
- Authors: Alexander J. Bradshaw; Kendra C. Autumn, Eric A. Rickart, Bryn T. M. Dentinger
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-01-11T11:48:47-08:00
  DOI: 10.1002/edn3.281
Environmental DNA‐based methods detect the invasion front of an
advancing signal crayfish population
- Authors: Jack A. Greenhalgh; Rupert A. Collins, Duncan E. Edgley, Martin J. Genner, Jan Hindle, Gareth Jones, Lesley Loughlin, Maire O’donnel, Michael J. Sweet, Richard W. Battarbee
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-01-05T11:40:52-08:00
  DOI: 10.1002/edn3.280
edna2021: The fourth annual meeting of The eDNA Society “Species
distributions, and beyond”
- Authors: Hitoshi Araki; Takashi Kanbe, Hiroki Yamanaka, Yuki Minegishi, Noriyuki Koizumi
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2022-01-05T04:16:24-08:00
  DOI: 10.1002/edn3.278
Assessing environmental DNA metabarcoding and camera trap surveys as
complementary tools for biomonitoring of remote desert water bodies
- Authors: Eduard Mas‐Carrió; Judith Schneider, Battogtokh Nasanbat, Samiya Ravchig, Mmabaledi Buxton, Casper Nyamukondiwa, Céline Stoffel, Claudio Augugliaro, Francisco Ceacero, Pierre Taberlet, Olivier Glaizot, Philippe Christe, Luca Fumagalli
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-12-29T12:34:00-08:00
  DOI: 10.1002/edn3.274
Contrasting microbial communities on male and female flowers of a
dioecious plant, Mallotus japonicus (Euphorbiaceae)
- Authors: Maxime Marre; Masayuki Ushio, Shoko Sakai
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-12-14T11:41:55-08:00
  DOI: 10.1002/edn3.271
Density‐independent prey choice, taxonomy, life history, and web
characteristics determine the diet and biocontrol potential of spiders
(Linyphiidae and Lycosidae) in cereal crops
- Authors: Jordan P. Cuff; Maximillian P.T.G. Tercel, Lorna E. Drake, Ian P. Vaughan, James R. Bell, Pablo Orozco‐terWengel, Carsten T. Müller, William O.C. Symondson
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-12-13T11:09:25-08:00
  DOI: 10.1002/edn3.272
Above‐ and below‐ground biodiversity responses to the prolonged flood
pulse in central‐western Amazonia, Brazil
- Authors: Yennie K. Bredin; Laura L. Hess, Andressa B. Scabin, Micah Dunthorn, Torbjørn Haugaasen, Carlos A. Peres, Henrik R. Nilsson, Alexandre Antonelli, Camila D. Ritter
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-12-03T11:09:07-08:00
  DOI: 10.1002/edn3.268
Metabarcoding hyperdiverse kelp holdfast communities on temperate reefs:
An experimental approach to inform future studies
- Authors: Vanessa Arranz; Libby Liggins, J. David Aguirre
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-11-27T12:45:01-08:00
  DOI: 10.1002/edn3.265
Targeted next‐generation sequencing of environmental DNA improves
detection of invasive European green crab (Carcinus maenas)
- Authors: Kristen Marie Westfall; Thomas W. Therriault, Cathryn L. Abbott
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-11-24T11:53:04-08:00
  DOI: 10.1002/edn3.261
Effect of biotic and abiotic factors on the production and degradation of
fish environmental DNA: An experimental evaluation
- Authors: Isabeau Caza‐Allard; Martin Laporte, Guillaume Côté, Julien April, Louis Bernatchez
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-11-24T11:52:27-08:00
  DOI: 10.1002/edn3.266
Heterogeneity across Neotropical aquatic environments affects prokaryotic
and eukaryotic biodiversity based on environmental DNA
- Authors: Andreas Härer; Anan Ibrahim, Julián Torres‐Dowdall, Axel Meyer
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-11-24T11:51:12-08:00
  DOI: 10.1002/edn3.267
Preservation of sedimentary plant DNA is related to lake water chemistry
- Authors: Weihan Jia; Xingqi Liu, Kathleen R. Stoof‐Leichsenring, Sisi Liu, Kai Li, Ulrike Herzschuh
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-11-16T10:40:25-08:00
  DOI: 10.1002/edn3.259
The amount of environmental DNA increases with freshwater crayfish density
and over time
- Authors: Daniela Sint; Bernhard Kolp, Oskar Rennstam Rubbmark, Leopold Füreder, Michael Traugott
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-11-12T11:37:59-08:00
  DOI: 10.1002/edn3.249
eDNA metabarcoding as a means to assess distribution of subterranean fish
communities: Iranian blind cave fishes as a case study
- Authors: Iraj Hashemzadeh Segherloo; Seyedeh Narjes Tabatabaei, Eisa Abdolahi‐Mousavi, Cecilia Hernandez, Eric Normandeau, Martin Laporte, Brian Boyle, Mohsen Amiri, Nabiallah GhaedRahmati, Eric Hallerman, Louis Bernatchez
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-11-09T05:40:36-08:00
  DOI: 10.1002/edn3.264
Fingerprinting Arctic and North Atlantic Macroalgae with eDNA –
Application and perspectives
- Authors: Sarah B. Ørberg; Dorte Krause‐Jensen, Nathan R. Geraldi, Alejandra Ortega, Rubén Díaz‐Rúa, Carlos M. Duarte
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-11-05T11:44:46-07:00
  DOI: 10.1002/edn3.262
Dataset complexity impacts both MOTU delimitation and biodiversity
estimates in eukaryotic 18S rRNA metabarcoding studies
- Authors: Alejandro De Santiago; Tiago José Pereira, Sarah L. Mincks, Holly M. Bik
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-11-03T10:42:07-07:00
  DOI: 10.1002/edn3.255
The development of early monitoring tools to detect aquatic invasive
species: eDNA assay development and the case of the armored catfish
Hypostomus robinii
- Authors: Thomas Dubreuil; Thomas Baudry, Quentin Mauvisseau, Alexandre Arqué, Clarisse Courty, Carine Delaunay, Michael Sweet, Frédéric Grandjean
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-10-26T07:40:00-07:00
  DOI: 10.1002/edn3.260
Ontogeny of eDNA shedding during early development in Chinook Salmon
(Oncorhynchus tshawytscha)
- Authors: Carl O. Ostberg; Dorothy M. Chase
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-10-24T01:03:40-07:00
  DOI: 10.1002/edn3.258
Distribution of the boreal chorus frog (Pseudacris maculata) in an urban
environment using environmental DNA
- Authors: Marie‐Pier Dubois‐Gagnon; Louis Bernatchez, Marc Bélisle, Yohann Dubois, Marc J. Mazerolle
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-10-05T10:59:08-07:00
  DOI: 10.1002/edn3.254
Linking the state of environmental DNA to its application for
biomonitoring and stock assessment: Targeting mitochondrial/nuclear genes,
and different DNA fragment lengths and particle sizes
- Authors: Toshiaki Jo; Kenta Takao, Toshifumi Minamoto
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-09-27T12:00:00-07:00
  DOI: 10.1002/edn3.253
Creating genetic reference datasets: Indirect sampling of target species
using terrestrial leeches as sample “collectors”
- Authors: Andreas Wilting; Thanh V. Nguyen, Jan Axtner, An Nguyen, Anke Schmidt, Minh Le, Anh H. Q. Nguyen, Benjamin M. Rawson, Andrew Tilker, Joerns Fickel
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-09-27T09:38:49-07:00
  DOI: 10.1002/edn3.256
Optimizing an enclosed bead beating extraction method for microbial and
fish environmental DNA
- Authors: Sean R. Anderson; Luke R. Thompson
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-09-13T12:31:43-07:00
  DOI: 10.1002/edn3.251
Development and validation of an environmental DNA protocol to detect an
invasive Caribbean freshwater fish, the guppy (Poecilia reticulata)
- Authors: Sierra N. Smith; Ingo Schlupp, Edward D. Higgins, Jessa L. Watters, Kerri‐Ann Bennett, Stefan Bräger, Cameron D. Siler
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-08-28T02:40:58-07:00
  DOI: 10.1002/edn3.248
Development of an environmental DNA assay and field validation for the
detection of invasive pink salmon Oncorhynchus gorbuscha
- Authors: Laura M. Gargan; Tor A. Mo, Jeanette E. L. Carlsson, Bernard Ball, Frode Fossøy, Jens Carlsson
  Abstract: Environmental DNA, EarlyView.
  PubDate: 2021-08-26T12:26:47-07:00
  DOI: 10.1002/edn3.250