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Journal of eScience Librarianship
Number of Followers: 183  

  This is an Open Access Journal Open Access journal
ISSN (Print) 2161-3974 - ISSN (Online) 2161-3974
Published by U of Massachusetts Homepage  [16 journals]
  • Skills, Standards, and Sapp Nelson's Matrix: Evaluating Research Data
           Management Workshop Offerings

    • Authors: Philip Espinola Coombs et al.
      Abstract: Objective: To evaluate library workshops on their coverage of data management topics.Methods: We used a modified version of Sapp Nelson’s Competency Matrix for Data Management Skills, a matrix of learning goals organized by data management competency and complexity level, against which we compared our educational materials: slide decks and worksheets. We examined each of the educational materials against the 333 learning objectives in our modified version of the Matrix to determine which of the learning objectives applied.Conclusions: We found it necessary to change certain elements of the Matrix’s structure to increase its clarity and functionality: reinterpreting the “behaviors,” shifting the organization from the three domains of Bloom’s taxonomy to increasing complexity solely within the cognitive domain, as well as creating a comprehensive identifier schema. We appreciated the Matrix for its specificity of learning objectives, its organizational structure, the comprehensive range of competencies included, and its ease of use. On the whole, the Matrix is a useful instrument for the assessment of data management programming.
      PubDate: Wed, 31 Jul 2019 21:04:51 PDT
       
  • Joining Together to Build More: The New England Software Carpentry Library
           Consortium

    • Authors: Thea P. Atwood et al.
      Abstract: In 2017 a group of academic library and information technology staff from institutions across New England piloted a process of joining The Carpentries, an organization developed to train researchers in essential computing skills and practices for automating and improving their handling of data, as a consortium. The New England Software Carpentry Library Consortium (NESCLiC) shared a gold-level tier membership to become a Carpentries member organization. NESCLiC members attended a Software Carpentry workshop together and then participated in instructor training as a cohort, collaborating on learning the material, practicing, and beginning to host and teach workshops as a group.This article describes both the successes and challenges of forming this new consortium, suggests good practices for those who might wish to form similar collaborations, and discusses the future of this program and other efforts to help researchers improve their computing and data handling skills.
      PubDate: Mon, 29 Jul 2019 08:14:45 PDT
       
  • Building A National Research Data Management Course for Health Information
           Professionals

    • Authors: Jessica Van Der Volgen et al.
      Abstract: Background: In August 2017 the National Network of Libraries of Medicine Training Office (NTO) was awarded an administrative supplement from the National Library of Medicine (NLM) to create training for librarians in biomedical and health research data management (RDM). The primary goal of the training was to enable information professionals to initiate or enhance RDM at their institutions.Case Presentation: An eight-week online course was developed to address key concepts in RDM. Each module was organized around measurable learning objectives using existing subject resources, such as readings, tutorials, and videos. Within each module, an expert in the field co-facilitated relevant discussions, created and graded a practical assignment, and answered questions. Thirty-eight participants were selected for this initial cohort. Mentors were assigned to each participant for guidance in completing a required project action plan to further their RDM goals at their institution. The course was evaluated through pre- and post-tests and an online questionnaire.Results: Thirty participants successfully completed the online course work and project, and gathered at the National Institutes of Health for a Capstone Summit. Students demonstrated improved knowledge of RDM concepts between the pre- and post-tests. Most students also self-reported increased skill and confidence. Practical assignments with individual feedback from experienced data librarians were the most valued aspect of the course. Time to complete each module was underestimated.Conclusions: The initial offering of this training program improved the RDM skills and knowledge of participants and enabled students to add or enhance services at their institutions. Further investigations are necessary to determine the longer-term impact on the individuals and their libraries. While many of the participants will need additional training to become part of the data-ready workforce of health information professionals, completing this training is an important step in their professional development.
      PubDate: Mon, 29 Jul 2019 08:14:33 PDT
       
  • Establishing a Research Data Management Service on a Health Sciences
           Campus

    • Authors: Kathryn Vela et al.
      Abstract: Objective: Given the increasing need for research data management support and education, the Spokane Academic Library at Washington State University (WSU) sought to determine the data management practices, perceptions, and needs of researchers on the WSU Spokane health sciences campus.Methods: A 23-question online survey was distributed to WSU researchers and research support staff through the campus listserv. This online survey addressed data organization, documentation, storage & backup, security, preservation, and sharing, as well as challenges and desired support services. Results: Survey results indicated that there was a clear need for more instruction with regard to data management planning, particularly as data management planning addresses the areas of metadata design, data sharing, data security, and data storage and backup.Conclusions: This needs assessment will direct how RDM services are implemented on the WSU Spokane campus by the Spokane Academic Library (SAL). These services will influence both research data quality and integrity through improved data management practices.
      PubDate: Thu, 21 Mar 2019 07:04:22 PDT
       
  • What’s in the Box' Assessing the potential usability of four decades
           of thesis and dissertation supplementary files

    • Authors: Steven Van Tuyl
      Abstract: Objectives: The objective of this study is to evaluate the quality and usability of supplementary data files deposited, between 1971 and 2015, to our university institutional repository. Understanding the extent to which content historically deposited in digital repositories is usable by today’s researchers can help inform digital preservation and documentation practices for researchers today.Methods: I identified all graduate level theses and dissertations (GTDs) in the institutional repository with multiple files as a first pass at identifying documents that included supplementary data files. These GTDs were then individually examined, removing supplementary files that were artifacts of either the upload or digitization process. The remaining “true” supplementary files were then individually opened and evaluated following elements of the DATA rubric of Van Tuyl and Whitmire (2016).Results: Supplementary files were discovered in the repository dating back to 1971 in 116 GTD submissions totalling more than 25,000 files. Most GTD submissions included fewer than 30 files, though some submissions included thousands of individual data files. The most common file types submitted include imagery, tabular data, and databases, with a very large number of unknown file types. Overall, levels of documentation were poor while actionability of datasets was generally middling.Conclusions: The results presented in this study suggest that legacy data submitted to our institutional repository with GTDs is generally in poor shape with respect to Transparency and somewhat less so for Actionability. It is clear from this study and others that researchers have a long road ahead when it comes to sharing data in a way that makes it potentially useable by other researchers.
      PubDate: Mon, 18 Mar 2019 11:47:18 PDT
       
  • Assessing Data Management Support Needs of Bioengineering and Biomedical
           Research Faculty

    • Authors: Christie A. Wiley et al.
      Abstract: Objectives: This study explores data management knowledge, attitudes, and practices of bioengineering and biomedical researchers in the context of the National Institutes of Health-funded research projects. Specifically, this study seeks to answer the following questions:
      What is the nature of biomedical and bioengineering research on the Illinois campus and what kinds of data are being generated'
      To what degree are biomedical and bioengineering researchers aware of best practices for data management and what are the actual data management behaviors'
      What aspects of data management present the greatest challenges and frustrations'
      To what degree are biomedical and bioengineering researchers aware of data sharing opportunities and data repositories, and what are their attitudes towards data sharing'
      To what degree are researchers aware of campus services and support for data management planning, data sharing, and data deposit, and what is the level of interest in instruction in these areas' Methods: Librarians on the University of Illinois at Urbana Champaign campus conducted semi-structured interviews with bioengineering and biomedical researchers to explore researchers’ knowledge of data management best practices, awareness of library campus services, data management behavior and challenges managing research data. The topics covered during the interviews were current research projects, data types, format, description, campus repository usage, data-sharing, awareness of library campus services, data reuse, the anticipated impact of health on public and challenges (interview questions are provided in the Appendix).Results: This study revealed the majority of researchers explore broad research topics, various file storage solutions, generate numerous amounts of data and adhere to differing discipline-specific practices. Researchers expressed both familiarity and unfamiliarity with DMP Tool. Roughly half of the researchers interviewed reported having documented protocols for file names, file backup, and file storage. Findings also suggest that there is ambiguity about what it means to share research data and confusion about terminology such as “repository” and “data deposit”. Many researchers equate publication to data sharing.Conclusions: The interviews reveal significant data literacy gaps that present opportunities for library instruction in the areas of file organization, project workflow and documentation, metadata standards, and data deposit options. The interviews also provide invaluable insight into biomedical and bioengineering research in general and contribute to the authors’ understanding of the challenges facing the researchers we strive to support.
      PubDate: Mon, 18 Mar 2019 11:47:08 PDT
       
  • Toward a Better Data Management Plan: The Impact of DMPs on Grant Funded
           Research Practices

    • Authors: Sara Mannheimer
      Abstract: Data Management Plans (DMPs) are often required for grant applications. But do strong DMPs lead to better data management and sharing practices' Several recent research projects in the Library and Information Science field have investigated data management planning and practice through DMP content analysis and data-management-related interviews. However, research hasn’t yet shown how DMPs ultimately affect data management and data sharing practices during grant-funded research. The research described in this article contributes to the existing literature by examining the impact of DMPs on grant awards and on Principal Investigators’ (PIs) data management and sharing practices. The results of this research suggest the following key takeaways: (1) Most PIs practice internal data management in order to prevent data loss, to facilitate sharing within the research team, and to seamlessly continue their research during personnel turnover; (2) PIs still have room to grow in understanding specialized concepts such as metadata and policies for use and reuse; (3) PIs may need guidance on practices that facilitate FAIR data, such as using metadata standards, assigning licenses to their data, and publishing in data repositories. Ultimately, the results of this research can inform academic library services and support stronger, more actionable DMPs. The substance of this article is based upon a lightning talk presentation at RDAP Summit 2018.
      PubDate: Fri, 21 Dec 2018 06:02:01 PST
       
  • Special Issue: 2018 Research Data Access and Preservation Summit

    • Authors: Tina Griffin et al.
      Abstract: The Journal of eScience Librarianship partners with the Research Data Access & Preservation (RDAP) Association to publish selected conference proceedings. This issue highlights some of the novel ideas, programs, and perspectives presented at the RDAP 2018 Summit.
      PubDate: Thu, 20 Dec 2018 16:52:43 PST
       
  • Behind eMammal’s Success: A Data Curator With A Data Standard

    • Authors: Jennifer Y. Zhao et al.
      Abstract: This paper explores the data challenges of a major collection method in the field of ecology: using infrared-activated cameras to detect wildlife. One such solution, eMammal, is now available to address these struggles. We delineate the key reason behind its success: a data curator who manages an established data standard and communicates with eMammal’s users and stakeholders. We outline the tasks of this data curator, mention how they can work with data librarians, and demonstrate that the data curator position is already applicable in several biological science fields with a few examples. We end by emphasizing the growth of such a position and how it contributes to the research field.The substance of this article is based upon a lightning talk presentation at RDAP Summit 2018.
      PubDate: Thu, 20 Dec 2018 16:52:33 PST
       
  • Space for Listening: using a library unConference as an alternative method
           of communication

    • Authors: Matthew Murray et al.
      Abstract: As part of the University of Nevada, Las Vegas (UNLV) “Top Tier” initiative, the University Libraries contributes to the development of campus infrastructure and services to support research data management (RDM) and data preservation. Positioning the Libraries within the UNLV community as both partner and site for this development, we organized a faculty-oriented Research Data Management unConference during UNLV’s Research Week.The unConference attracted researchers and high-level administration from across campus and provided a forum for engagement; it was also a means for the Libraries to learn about researcher needs related to RDM, identifying potential partners, problems, and areas of support. Bridging disciplinary silos, invited speakers from academic and administrative units gave short presentations on different aspects of data management, which were followed by in-depth discussions of participant-selected topics relevant to RDM. The unConference succeeded in creating a space for meaningful interaction, with participants expressing interest in ongoing dialogue around RDM facilitated by the Libraries. Furthermore, the interactions we facilitated and feedback we received helped inform the Libraries’ next steps as we move the RDM conversation forward.This paper outlines the process of organizing and facilitating an unconference, lessons learned regarding outreach and researcher engagement, and potential pitfalls to avoid for library staff seeking to diversify their information-gathering strategies.The substance of this article is based upon poster presentations at RDAP Summit 2018 and the ALA Annual Conference and Exhibition 2018.
      PubDate: Thu, 20 Dec 2018 16:52:24 PST
       
  • Integrating Data Science Tools into a Graduate Level Data Management
           Course

    • Authors: Pete E. Pascuzzi et al.
      Abstract: Objective: This paper describes a project to revise an existing research data management (RDM) course to include instruction in computer skills with robust data science tools.Setting: A Carnegie R1 university.Brief Description: Graduate student researchers need training in the basic concepts of RDM. However, they generally lack experience with robust data science tools to implement these concepts holistically. Two library instructors fundamentally redesigned an existing research RDM course to include instruction with such tools. The course was divided into lecture and lab sections to facilitate the increased instructional burden. Learning objectives and assessments were designed at a higher order to allow students to demonstrate that they not only understood course concepts but could use their computer skills to implement these concepts.Results: Twelve students completed the first iteration of the course. Feedback from these students was very positive, and they appreciated the combination of theoretical concepts, computer skills and hands-on activities. Based on student feedback, future iterations of the course will include more “flipped” content including video lectures and interactive computer tutorials to maximize active learning time in both lecture and lab.The substance of this article is based upon poster presentations at RDAP Summit 2018.
      PubDate: Thu, 20 Dec 2018 16:52:13 PST
       
  • Open Access, Open Data, and Open Scholarship

    • Authors: Regina Fisher Raboin
      Abstract: The Journal of eScience Librarianship is in the “business of scholarship” and dedicated to openly disseminating the theory and practice of librarians who are active in data-driven research, open access, science, and data. This issue’s authors write about developing programs, tools, and frameworks in support of open data and data management.
      PubDate: Fri, 30 Nov 2018 12:03:43 PST
       
  • Support for Electronic Lab Notebooks at Top American Research Universities

    • Authors: Franklin Sayre et al.
      Abstract: Objective: Electronic Laboratory Notebooks (ELNs) are widely used in industry but little is known about their use in academia or the extent to which they are licensed or supported by research institutions or academic libraries.Methods: This paper describes an environmental scan conducted to determine whether major research institutions in the United States are providing enterprise ELN licenses to their users, which products they are licensing, and what role of the institutional library is playing in licensing and supporting ELNs.Results: Of the 35 universities included in our scan, 8 (23%) had an enterprise-wide license for an ELN and 10 (28%) provided some kind of support for ELNs. Of the 10 institutions that offered support for ELNs, 9 involved the library. A literature review revealed a number of barriers to adoption—from costs to the diversity of needs—that may be limiting the adoption of ELNs within research institutions.Conclusions: This research provides evidence about the current landscape of ELN support within academic institutions and the role of libraries in these initiatives.
      PubDate: Fri, 19 Oct 2018 05:32:49 PDT
       
  • The Problem with Dates: Applying ISO 8601 to Research Data Management

    • Authors: Kristin A. Briney
      Abstract: Dates appear regularly in research data and metadata but are a problematic data type to normalize due to a variety of potential formats. This suggests an opportunity for data librarians to assist with formatting dates, yet there are frequent examples of data librarians using diverse strategies for this purpose. Instead, data librarians should adopt the international date standard ISO 8601. This standard provides needed consistency in date formatting, allows for inclusion of several types of date-time information, and can sort dates chronologically. As regular advocates for standardization in research data, data librarians must adopt ISO 8601 and push for its use as a data management best practice.
      PubDate: Thu, 06 Sep 2018 14:18:31 PDT
       
  • Supporting the Proliferation of Data-Sharing Scholars in the Research
           Ecosystem

    • Authors: Ali Krzton
      Abstract: Librarians champion the value of openness in scholarship and have been powerful advocates for the sharing of research data. College and university administrators have recently joined in the push for data sharing due to funding mandates. However, the researchers who create and control the data usually determine whether and how data is shared, so it is worthwhile to look at what they are incentivized to do. The current scholarly publishing landscape plus the promotion and tenure process create a “prisoner’s dilemma” for researchers as they decide whether or not to share data, consistent with the observation that researchers in general are eager for others to share data but reluctant to do so themselves. If librarians encourage researchers to share data and promote openness without simultaneously addressing the academic incentive structure, those who are intrinsically motivated to share data will be selected against via the promotion and tenure process. This will cause those who are hostile to sharing to be disproportionately recruited into the senior ranks of academia. To mitigate the risk of this unintended consequence, librarians must advocate for a change in incentives alongside the call for greater openness. Highly-cited datasets must be given similar weight to highly-cited articles in promotion and tenure decisions in order for researchers to reap the rewards of their sharing. Librarians can help by facilitating data citation to track the impact of datasets and working to persuade higher administration of the value of rewarding data sharing in tenure and promotion.
      PubDate: Mon, 30 Jul 2018 07:53:05 PDT
       
  • A Newbie at the RDAP Summit, or How I Learned that the RDAP Summit is for
           Everyone

    • Authors: Joanna Thielen
      Abstract: This commentary describes the thoughts and perceptions of a first-time attendee to the Research Data Access and Preservation (RDAP) Summit in March 2018. The author describes her initial hesitations to attend this conference as a data librarian from a medium-sized institution. But after attending, she is convinced that the RDAP Summit is for anyone interested in data, including librarians that work at medium- and small-sized institutions.After describing the format of the Summit, the highlights of attending are described, including gathering ideas related to all aspects of research data management, access, and preservation; hearing data management perspectives from outside of academic libraries; networking opportunities for the extrovert and introvert; and opportunities to connect with librarians at similar universities and with similar interests.
      PubDate: Mon, 30 Jul 2018 07:52:58 PDT
       
  • Health Sciences Libraries Advancing Collaborative Clinical Research Data
           Management in Universities

    • Authors: Tania P. Bardyn et al.
      Abstract: Purpose: Medical libraries need to actively review their service models and explore partnerships with other campus entities to provide better-coordinated clinical research management services to faculty and researchers. TRAIL (Translational Research and Information Lab), a five-partner initiative at the University of Washington (UW), explores how best to leverage existing expertise and space to deliver clinical research data management (CRDM) services and emerging technology support to clinical researchers at UW and collaborating institutions in the Pacific Northwest.Methods: The initiative offers 14 services and a technology-enhanced innovation lab located in the Health Sciences Library (HSL) to support the University of Washington clinical and research enterprise. Sharing of staff and resources merges library and non-library workflows, better coordinating data and innovation services to clinical researchers. Librarians have adopted new roles in CRDM, such as providing user support and training for UW’s Research Electronic Data Capture (REDCap) instance.Results: TRAIL staff are quickly adapting to changing workflows and shared services, including teaching classes on tools used to manage clinical research data. Researcher interest in TRAIL has sparked new collaborative initiatives and service offerings. Marketing and promotion will be important for raising researchers’ awareness of available services.Conclusions: Medical librarians are developing new skills by supporting and teaching CRDM. Clinical and data librarians better understand the information needs of clinical and translational researchers by being involved in the earlier stages of the research cycle and identifying technologies that can improve healthcare outcomes. At health sciences libraries, leveraging existing resources and bringing services together is central to how university medical librarians will operate in the future.
      PubDate: Fri, 20 Jul 2018 10:50:19 PDT
       
  • Assessing and Improving Library Technology with Service Blueprinting

    • Authors: Scott W. H. Young et al.
      Abstract: Objective: The objective of this article is to illustrate the application of service blueprinting—a design tool that comes from the service design tradition—for assessing and improving library technology services.Setting: A mid-sized library at a public university in the western United States.Methods: A service blueprint was co-created by library and IT staff in a design workshop in order to map the operational flow of a data visualization display wall.Results: Guided by the service blueprint, the project team identified points of improvement for the service of the data visualization display wall, and developed recommendations to aid further applications of service blueprinting.Conclusions: Ultimately, service blueprinting was found to be a useful tool that can be applied to assess and improve library technology services.
      PubDate: Tue, 03 Jul 2018 07:13:42 PDT
       
  • Developing a Bioinformatics Program and Supporting Infrastructure in a
           Biomedical Library

    • Authors: Nathan Hosburgh
      Abstract: Background: Over the last couple decades, the field of bioinformatics has helped spur medical discoveries that offer a better understanding of the genetic basis of disease, which in turn improve public health and save lives. Concomitantly, support requirements for molecular biology researchers have grown in scope and complexity, incorporating specialized resources, technologies, and techniques.Case Presentation: To address this specific need among National Institutes of Health (NIH) intramural researchers, the NIH Library hired an expert bioinformatics trainer and consultant with a PhD in biochemistry to implement a bioinformatics support program. This study traces the program from its inception in 2009 to its present form. Discussion involves the particular skills of program staff, development of content, collection of resources, associated technology, assessment, and the impact of the program on the NIH community.Conclusion: Based on quantitative and qualitative data, the bioinformatics support program has been heavily used and appreciated by researchers. Continued success will depend on filling key staff positions, building on the existing program infrastructure, and keeping abreast of developments within the field to remain relevant and in touch with the medical research community utilizing bioinformatics services.
      PubDate: Fri, 16 Mar 2018 10:36:09 PDT
       
  • The Data Engagement Opportunities Scaffold: Development and Implementation

    • Authors: Abigail Goben et al.
      Abstract: While interest in research data management (RDM) services have grown, clarifying the path between traditional library responsibilities and RDM remains a challenge. While the literature has provided ideas about services and student-/researcher-focused data information literacy (DIL) competencies, nothing has yet brought these skill sets together to provide a pathway for librarians engaging in RDM. The Data Engagement Opportunities scaffold was developed to provide a strategic trajectory relating information science skills, the DIL competencies, the stages of the data life cycle, three levels of RDM engagement activities, and potential measurable outcomes. This scaffold provides direction for librarians looking to identify their current abilities and explore new opportunities.
      PubDate: Fri, 16 Mar 2018 10:36:04 PDT
       
 
 
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